CalculateFeatureRanking

Input the name of the created mSetObj (see InitDataObjects)

mSetObj

Numeric, input the number of clusters for cluster-analysis

clust.num

Perform calculation of feature importance (AUC, p value, fold change)

This package contains the R functions and libraries underlying the popular MetaboAnalyst web server, including 500 functions for data processing, normalization, statistical analysis, metabolite set enrichment analysis, metabolic pathway analysis, and biomarker analysis. The package is synchronized with the web server. After installing and loading the package, users will be able to reproduce the same results from their local computers using the corresponding R command history downloaded from MetaboAnalyst, to achieve maximum flexibility and reproducibility.

CalculateFeatureRanking: Calculates feature importance

Description

Usage

Arguments