FC.Anal.paired

Input the name of the created mSetObj (see InitDataObjects)

mSetObj

Fold-change threshold, numeric input

fc.thresh

Numeric input, from 0 to 1 to indicate the significant count threshold

percent.thresh

Comparison type, 0 for group 1 minus group 2, and 1 for group

cmp.type

Perform paired fold change analysis

This package contains the R functions and libraries underlying the popular MetaboAnalyst web server, including 500 functions for data processing, normalization, statistical analysis, metabolite set enrichment analysis, metabolic pathway analysis, and biomarker analysis. The package is synchronized with the web server. After installing and loading the package, users will be able to reproduce the same results from their local computers using the corresponding R command history downloaded from MetaboAnalyst, to achieve maximum flexibility and reproducibility.

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FC.Anal.paired: Fold change analysis, paired

Description

Usage

Arguments