GetImpFeatureMat

Input the name of the created mSetObj (see InitDataObjects)

mSetObj

Input the list that contains the ranked features in each 
cross validation (CV) and returns a two column matrix, col 1 = median ranking 
and col 2 = mean importance measure

feat.outp

bestFeatNum

feat.outp is a list that contains the ranked features in each 
cross validation (CV) and returns a two column matrix, col 1 = median ranking 
and col 2 = mean importance measure

This package contains the R functions and libraries underlying the popular MetaboAnalyst web server, including 500 functions for data processing, normalization, statistical analysis, metabolite set enrichment analysis, metabolic pathway analysis, and biomarker analysis. The package is synchronized with the web server. After installing and loading the package, users will be able to reproduce the same results from their local computers using the corresponding R command history downloaded from MetaboAnalyst, to achieve maximum flexibility and reproducibility.

GetImpFeatureMat: Get important feature matrix

Description

Usage

Arguments