InitDataObjects

The type of data, either list (Compound lists), conc (Compound concentration data), 
specbin (Binned spectra data), pktable (Peak intensity table), nmrpeak (NMR peak lists), mspeak (MS peak lists), 
or msspec (MS spectra data)

data.type

Indicate the analysis module to be performed: stat, pathora, pathqea, msetora, msetssp, msetqea, ts, 
cmpdmap, smpmap, or pathinteg

anal.type

Indicate if the data is paired or not. Logical, default set to FALSE

paired

This functions handles the construction of a mSetObj object for storing data for further processing and analysis.
It is necessary to utilize this function to specify to MetaboAnalystR the type of data and the type of analysis you will perform.

This package contains the R functions and libraries underlying the popular MetaboAnalyst web server, including 500 functions for data processing, normalization, statistical analysis, metabolite set enrichment analysis, metabolic pathway analysis, and biomarker analysis. The package is synchronized with the web server. After installing and loading the package, users will be able to reproduce the same results from their local computers using the corresponding R command history downloaded from MetaboAnalyst, to achieve maximum flexibility and reproducibility.

InitDataObjects: Constructs a dataSet object for storing data

Description

Usage

Arguments