MSspec.fillPeaks

<p>Input the name of the created mSetObj (see InitDataObjects)</p>

mSetObj

<p>For each sample in the processed MS spectra data, this function will fill in missing peaks 
using the fillPeaks function from the XCMS package. First, the function will identify any peak groups that are missing 
any peaks from the samples and will then fill in those peaks by rereading the raw data and 
integrating signals at those regions to create a new peak.</p>

This package contains the R functions and libraries underlying the popular MetaboAnalyst web server, including 500 functions for data processing, normalization, statistical analysis, metabolite set enrichment analysis, metabolic pathway analysis, and biomarker analysis. The package is synchronized with the web server. After installing and loading the package, users will be able to reproduce the same results from their local computers using the corresponding R command history downloaded from MetaboAnalyst, to achieve maximum flexibility and reproducibility.

Jasmine Chong

MSspec.fillPeaks: Function to fill in missing peaks

Description

Usage

Arguments