PLSDA.Permut

Input name of the created mSet Object

mSetObj

Numeric, input the number of permutations

Type of accuracy, if "accu" indicate prediction accuracy, else "sep" is separation distance

type

Perform PLS-DA permutation using training classification accuracy as
indicator, for two or multi-groups

This package contains the R functions and libraries underlying the popular MetaboAnalyst web server, including 500 functions for data processing, normalization, statistical analysis, metabolite set enrichment analysis, metabolic pathway analysis, and biomarker analysis. The package is synchronized with the web server. After installing and loading the package, users will be able to reproduce the same results from their local computers using the corresponding R command history downloaded from MetaboAnalyst, to achieve maximum flexibility and reproducibility.

PLSDA.Permut: Perform PLS-DA permutation

Description

Usage

Arguments