PerformPvalCombination

Input name of the created mSet Object.

mSetObj

Method of p-value combination. By default it is "stouffer", else it is "fisher".

method

Numeric input to set the significance level. By default it is 0.05.

BHth

This function is one of three methods to perform meta-analysis. Here, p-values are combined using either
the Fisher's method or the Stouffer's method.

This package contains the R functions and libraries underlying the popular MetaboAnalyst web server, including 500 functions for data processing, normalization, statistical analysis, metabolite set enrichment analysis, metabolic pathway analysis, and biomarker analysis. The package is synchronized with the web server. After installing and loading the package, users will be able to reproduce the same results from their local computers using the corresponding R command history downloaded from MetaboAnalyst, to achieve maximum flexibility and reproducibility.

PerformPvalCombination: Meta-Analysis Method: Combining p-values

Description

Usage

Arguments