PlotSPLS3DScore

Input name of the created mSet Object

mSetObj

imgName

Select the image format, "png", or "pdf".

format

Numeric, indicate the number of the principal component for the x-axis of the loading plot.

inx1

Numeric, indicate the number of the principal component for the y-axis of the loading plot.

inx2

Numeric, indicate the number of the principal component for the z-axis of the loading plot.

inx3

Sparse PLS-DA (from mixOmics) 3D score plot

This package contains the R functions and libraries underlying the popular MetaboAnalyst web server, including 500 functions for data processing, normalization, statistical analysis, metabolite set enrichment analysis, metabolic pathway analysis, and biomarker analysis. The package is synchronized with the web server. After installing and loading the package, users will be able to reproduce the same results from their local computers using the corresponding R command history downloaded from MetaboAnalyst, to achieve maximum flexibility and reproducibility.

PlotSPLS3DScore: 3D SPLS-DA score plot

Description

Usage

Arguments