SAM.Anal

Input name of the created mSet Object

mSetObj

Method for SAM analysis, default is set to "d.stat", alternative is "wilc.stat"

method

Logical, indicates if samples are paired or not. Default is set to FALSE

paired

Logical, indicates if variance is equal. Default is set to TRUE

varequal

This package contains the R functions and libraries underlying the popular MetaboAnalyst web server, including 500 functions for data processing, normalization, statistical analysis, metabolite set enrichment analysis, metabolic pathway analysis, and biomarker analysis. The package is synchronized with the web server. After installing and loading the package, users will be able to reproduce the same results from their local computers using the corresponding R command history downloaded from MetaboAnalyst, to achieve maximum flexibility and reproducibility.

SAM.Anal: Perform Signifiance Analysis of Microarrays (SAM) analysis

Description

Usage

Arguments