grepgraph_cpd

cpds

fullGraph

<p>Takes in a vector list of KO ids and generates a metabolic graph as a igraph object</p>

internal

Functions for path based queries against 'Omics' <https://github.com/etheleon/omics-neo4j-container>, a 'NEO4J' <https://neo4j.com/> database populated with data from metagenomic surveys and their accompanying metabolic and taxonomic annotations.

Wesley GOI

MetamapsDB

Network Analysis of Metabolic Pathways and Gene Based Assemblies
in Metagenomics

grepgraph_cpd function

Generates metabolic network as IGRAPH object from input vector KOs
Returns the metabolic graph given vector of KOs — grepgraph_cpd

Generates metabolic network as IGRAPH object from input vector KOs
Returns the metabolic graph given vector of KOs

grepgraph_cpd: Generates metabolic network as IGRAPH object from input vector KOs Returns the metabolic graph given vector of KOs

Description

Usage

Arguments