MetamapsDB (version 0.0.2)

mdrRanges: Returns contig ranges for those captured within the MDR

Description

Header for contigs contig00026 ref|YP_002288046.1| (ntRev) ## spanning:123 msaStart:653 msaEND:944 max10BPwindow:205.4 contigStart: 221 contigEnd: 421 Give GRanges output with seqname ko|contig00001

Usage

mdrRanges(ko, passDir)

Arguments

ko

the KO of interest

passDir

path to pAss outputs

Examples

# NOT RUN {
locsMDR = mdrRanges('K00927')
# }