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MethylCapSig (version 1.0.1)

Detection of Differentially Methylated Regions using MethylCap-Seq Data

Description

Provides a univariate and several high dimensional multivariate test statistics for detecting differentially methylated regions based on MethylCap-seq data.

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Version

Install

install.packages('MethylCapSig')

Monthly Downloads

11

Version

1.0.1

License

LGPL-3

Maintainer

Deepak Nag Ayyala

Last Published

August 12th, 2015

Functions in MethylCapSig (1.0.1)

skktest

Srivastava-Katayama-Kano test statistic
diffMethylData

Randomly generated nucleotide-resolution methylation signal data
patest

Park-Ayyala test statistic
cqtest

Chen-Qin test statistic
mvlognormal

Multivariate lognormal random variable generator.
ttest

One sample and two sample $t$-test using total methylation signal per region
MethylCapSig-package

Detection of differentially methylated regions using MethylCap-seq data.
methmage

MethMAGE test