METcancer_CDH1


     Raw DNA methylation data for CDH1 from the 450k Infinium platform from breast 
     cancer patients from the TCGA project.


MethylMix is an algorithm implemented to identify hyper
and hypomethylated genes for a disease. MethylMix is based on a
beta mixture model to identify methylation states and compares
them with the normal DNA methylation state. MethylMix uses a
novel statistic, the Differential Methylation value or DM-value
defined as the difference of a methylation state with the
normal methylation state. Finally, matched gene expression data
is used to identify, besides differential, functional
methylation states by focusing on methylation changes that
effect gene expression.

Olivier Gevaert

MethylMix

MethylMix: Identifying methylation driven cancer genes.

METcancer_CDH1 function

Format

Source

Raw DNA methylation data for CDH1 from the 450k Infinium platform from breast 
     cancer patients from the TCGA project.

METcancer_CDH1: DNA methylation data for CDH1 from the breast cancer TCGA project.

Description

Usage

Arguments

Format

Source

References