Mfuzz (version 2.32.0)

top.count: Determines the number for which each gene has highest membership value in all cluster

Description

This function calculates the number,for which each gene appears to have the top membership score in the partition matrix of clusters produced by mfuzz.

Usage

top.count(cl)

Arguments

cl

object of class “flclust”

Value

number of times that particular gene has acquired the top membership score.

Examples

if (interactive()){
data(yeast)
# Data pre-processing
yeastF <- filter.NA(yeast)
yeastF <- fill.NA(yeastF)
yeastF <- standardise(yeastF)

# Soft clustering and visualisation
cl <- mfuzz(yeastF,c=20,m=1.25)
top.count(cl)
}