MiChip (version 1.26.0)

parseRawData: Parse raw data files to create an ExpressionSet

Description

Loads all the gpr scanner output files in a particular directory and returns an ExpressionSet of the hybridizations in a MiChip experiment

Usage

parseRawData(datadir=".", pat="gpr")

Arguments

datadir

a directory containing one or my files of scanner output from MiChip hybridizations

pat

a string containing the three letter extension of the scanner output files

Examples

## Not run: 
# ## Load all *.gpr files in current directory
# parseRawData(datadir=".", pat="gpr")
# 
# 
# ## Load all *.gpr files in a specified directory , windows
# parseRawData(datadir="c:\mydata\grpdata\expt1\", pat="gpr")
# 
# 
# ## Load all *.gpr files in a specified directory, linux
# parseRawData(datadir="/home/myuser/gprdata/extp1/", pat="gpr")
# ## End(Not run)