MiChip (version 1.26.0)

plotIntensitiesScatter: Plot pairwise intensity scatter

Description

Creates a pairwise set of scatter plots from a data matrix and writes it out to file

Usage

plotIntensitiesScatter(dmat, controls=NULL, exptname, maintitle)

Arguments

dmat

matrix containing data from an experiment to be plotted

controls

matrix of row numbers containing control data to be plotted in a different colour

exptname

Name of the experiment, used for build the filename

maintitle

String used to build the maintitle of the graph

Examples

#Plot the pairwise intensities from myexpt
## Not run: 
# plotIntensitiesScatter(dmat, NULL, "MyExpt", "Median_Normalized")
# ## End(Not run)