MiChip (version 1.26.0)

removeUnwantedRows: Removes unwanted rows from data matrix

Description

Due to the requirements of spotting the chips, some of the spots are empty. Others contain controls or features from another species that may not be wanted in the analysis. This method removes them

Usage

removeUnwantedRows(rawData, filters)

Arguments

rawData

ExpressionSet containing matrix of data to be filtered

filters

list of strings to be to be filtered from annotation gene name column

Examples

#Removes empty and control spots from data matrix
## Not run: 
# filters=c("empty", "control")
# filteredData <- removeUnwantedRows(rawData, filters)## End(Not run)