setup_aqua_trace

Emergence is passed as a (possibly time varying) parameter which is
decoupled from the adult mosquito dynamics. This module assumes <code>l</code> and <code>p</code>
are equivalent, as emergence rates are given for <code>p</code>.

Provides a framework based on S3 dispatch for constructing models
of mosquito-borne pathogen transmission which are constructed from submodels of various
components (i.e. immature and adult mosquitoes, human populations). A consistent mathematical
expression for the distribution of bites on hosts means that different models
(stochastic, deterministic, etc.) can be coherently incorporated and updated
over a discrete time step.

Sean L. Wu

MicroMoB

Discrete Time Simulation of Mosquito-Borne Pathogen Transmission

David L. Smith

Sophie Libkind

setup_aqua_trace function

<dl><dt>model</dt>
<dd>an object from make_MicroMoB</dd>
<dt>lambda</dt>
<dd>daily emergence of mosquitoes, may be time and patch varying, see time_patch_varying_parameter</dd>
<dt>stochastic</dt>
<dd>should the model update deterministically or stochastically?</dd></dl>

Arguments

Setup aquatic (immature) mosquito model with trace (forced) emergence — setup_aqua_trace

<dl>

<dt>model</dt>
<dd>an object from make_MicroMoB</dd>


<dt>lambda</dt>
<dd>daily emergence of mosquitoes, may be time and patch varying, see time_patch_varying_parameter</dd>


<dt>stochastic</dt>
<dd>should the model update deterministically or stochastically?</dd>

</dl>

setup_aqua_trace: Setup aquatic (immature) mosquito model with trace (forced) emergence

Description

Usage

Value

Arguments