Slist

SlistByGene

object

These generic functions retrieve, from an IcaSet object,
  the feature and gene projections contained in
  the attribute <code>S</code> and <code>SByGene</code>  as
  a list where feature and gene IDs are preserved.


The goal of MineICA is to perform Independent Component
Analysis (ICA) on multiple transcriptome datasets, integrating
additional data (e.g molecular, clinical and pathological).
This Integrative ICA helps the biological interpretation of the
components by studying their association with variables (e.g
sample annotations) and gene sets, and enables the comparison
of components from different datasets using correlation-based
graph.

Anne Biton

MineICA

Analysis of an ICA decomposition obtained on genomics data

Slist function

These generic functions retrieve, from an IcaSet object,
  the feature and gene projections contained in
  the attribute <code>S</code> and <code>SByGene</code>  as
  a list where feature and gene IDs are preserved.

Retrieve feature/gene projections stored in an <code><a href="IcaSet" rd-options="">IcaSet</a></code> object
  as a list.

Retrieve feature/gene projections stored in an <code><a rd-options="" href="/link/IcaSet?package=MineICA&version=1.12.0" data-mini-rdoc="MineICA::IcaSet">IcaSet</a></code> object
  as a list.

Slist: Retrieve feature/gene projections stored in an `IcaSet` object as a list.

Description

Usage

Arguments

Value

See Also