ssGBLUP

pedigree relationship matrix of non-genotyped individuals

pedigree relationship matrix between non-genotyped and genotyped individuals

pedigree relationship matrix of genotyped individuals

genomic relationship matrix of genotyped individuals

Function to perform single step GBLUP according to Legarra 2014

Framework for the simulation framework for the simulation of complex breeding programs and compare their economic and genetic impact. The package is also used as the background simulator for our a web-based interface <http:www.mobps.de>. Associated publication: Pook et al. (2020) <doi:10.1534/g3.120.401193>.

Torsten Pook

MoBPS

Modular Breeding Program Simulator

ssGBLUP function

<dl><dt>A11</dt>
<dd>pedigree relationship matrix of non-genotyped individuals</dd>
<dt>A12</dt>
<dd>pedigree relationship matrix between non-genotyped and genotyped individuals</dd>
<dt>A22</dt>
<dd>pedigree relationship matrix of genotyped individuals</dd>
<dt>G</dt>
<dd>genomic relationship matrix of genotyped individuals</dd></dl>

Arguments

Single Step GBLUP — ssGBLUP

<dl>

<dt>A11</dt>
<dd>pedigree relationship matrix of non-genotyped individuals</dd>


<dt>A12</dt>
<dd>pedigree relationship matrix between non-genotyped and genotyped individuals</dd>


<dt>A22</dt>
<dd>pedigree relationship matrix of genotyped individuals</dd>


<dt>G</dt>
<dd>genomic relationship matrix of genotyped individuals</dd>

</dl>

ssGBLUP: Single Step GBLUP

Description

Usage

Value

Arguments