ccycle


Example dataset as used in the MoPS Vignette Case Study.
Data matrix with 500 time series of gene expression measurements of 41 consecutive measurements seperated by 5 minutes (columns).
It is a subset of the dataset published in Eser et al. (Mol Sys Biol, 2014). ArrayExpress accession: E-MTAB-1908.     


datasets

Identification and characterization of periodic
fluctuations in time-series data.

Philipp Eser

MoPS

MoPS - Model-based Periodicity Screening

ccycle function

The format is:
 num [1:500, 1:41] 
 - attr(*, "dimnames")=List of 2
  ..$ : chr [1:500] "YKR077W" "YJL218W" "YGR009C" "YIL104C" ...
  ..$ : chr [1:41] "5" "10" "15" "20" ...

Format

Periodic mRNA synthesis and degradation co-operate during cell cycle gene expression (Eser et al. Mol Sys Biol, 2014)

Source

Example dataset as used in the MoPS Vignette Case Study.
Data matrix with 500 time series of gene expression measurements of 41 consecutive measurements seperated by 5 minutes (columns).
It is a subset of the dataset published in Eser et al. (Mol Sys Biol, 2014). ArrayExpress accession: E-MTAB-1908.

ccycle: Dataset containing 500 time series gene expression measurements.

Description

Usage

Arguments

Format

Source

Details