Mulcom (version 1.22.0)

mulOpt: MulCom optimization

Description

The function systematically performs the calculation of significant genes and corresponding FDR for all the combination of given list of m and t values.

Usage

mulOpt(Mulcom_P, vm, vt)

Arguments

Mulcom_P

an object of class Mulcom_P

vm

a vector of m values to test

vt

a vector of t values to test

Details

mulOpt The function systematically performs the calculation of significant genes and corresponding FDR for all the combination of given list of m and t values.

Examples

data(benchVign)
mulcom_perm <- mulPerm(Affy, Affy$Groups, 10, 7)
mulcom_opt <- mulOpt(mulcom_perm, seq(0.1, 0.5, 0.1), seq(1, 3, 0.1))