Mulcom (version 1.22.0)

mulPermC: MulCom Permutation

Description

R pipe to C function not called directly by user that reiterate MulCom Test on permutated data to perform Monte Carlo simulation

Usage

mulPermC(eset, index, means, mse, n, m, nump, ngroups, reference)

Arguments

eset

An an AffyBatch object, each row of must correspond to a variable and each column to a sample.

index

a numeric vector of length ncol(data) with the labels of the samples. 0 are the reference samples.

means

entry for the means output.

mse

entry for the mean square errors output

n

number of rows in obext of class eset

m

number of columns

nump

number of permutation to perform

ngroups

a number corresponding to the number of groups in the analysis.

reference

reference for the comparisons. typically it is 0

Details

mulPerm

Examples

data(benchVign)