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MullerPlot

The goal of MullerPlot is to generate Muller diagrams. Muller diagrams are plots which show the succession of different OTUs and their relative abundance/population dynamics over time. They are powerful and fascinating tools to visualize evolutionary processes, diversity and their dynamics, i.e. how diversity emerges and how changes over time. They are called Muller plots in honor of Hermann Joseph Muller which used them to explain his idea of Muller's ratchet. For more information please see the vignette.

Installation

You can install the development version of MullerPlot like so:

install.packages("MullerPlot")

Example

Please see the vignette.

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Version

Install

install.packages('MullerPlot')

Monthly Downloads

197

Version

0.1.3

License

GPL-3

Maintainer

Farnoush Farahpour

Last Published

April 27th, 2022

Functions in MullerPlot (0.1.3)

Muller.plot

Muller.plot
MullerPlot

MullerPlot: A package for generating Muller plot from population/abundance/frequency dynamics and parental/geneaolgy/phylogeny relation.
Attributes

Attributes of OTUs
PopulationDataList

Population/Abundance data of OTUs over time for "list" method
PopulationDataTable

Population/Abundance data of OTUs over time for "table" method