mergeNodes

A <code><a rd-options="=graph-class" href="/link/graph?package=NCIgraph&version=1.20.0&to=%3Dgraph-class" data-mini-rdoc="=graph-class::graph">graph</a></code> object.

A <code><a rd-options="base" href="/link/list?package=NCIgraph&version=1.20.0&to=base" data-mini-rdoc="base::list">list</a></code> of nodes to be merged.

mEdges

A <code><a rd-options="base" href="/link/logical?package=NCIgraph&version=1.20.0&to=base" data-mini-rdoc="base::logical">logical</a></code>. If <code><a rd-options="base:logical" href="/link/TRUE?package=NCIgraph&version=1.20.0&to=base%3Alogical" data-mini-rdoc="base:logical::TRUE">TRUE</a></code>, don't merge two nodes with entrezID.

separateEntrez

A <code><a rd-options="base" href="/link/logical?package=NCIgraph&version=1.20.0&to=base" data-mini-rdoc="base::logical">logical</a></code>. If <code><a rd-options="base:logical" href="/link/TRUE?package=NCIgraph&version=1.20.0&to=base%3Alogical" data-mini-rdoc="base:logical::TRUE">TRUE</a></code>, only keep nodes with an entrezID property.

entrezOnly


 Merges a given list of nodes in a graph.


Provides various methods to load the pathways from the NCI
Pathways Database in R graph objects and to re-format them.

Laurent Jacob

NCIgraph

Pathways from the NCI Pathways Database

mergeNodes function

A <code><a href="graph" rd-options="=graph-class">graph</a></code> object.

A <code><a href="list" rd-options="base">list</a></code> of nodes to be merged.

A <code><a href="logical" rd-options="base">logical</a></code>. If <code><a href="TRUE" rd-options="base:logical">TRUE</a></code>, don't merge two nodes with entrezID.

A <code><a href="logical" rd-options="base">logical</a></code>. If <code><a href="TRUE" rd-options="base:logical">TRUE</a></code>, only keep nodes with an entrezID property.

mergeNodes: Merges a given list of nodes in a graph

Description

Usage

Arguments

Value

See Also