setup_output_file

Creates a skeleton HDF5 file for the calibrated data,
essentially setting up the HDF5 groups at the /site/dp01/{data,ucrt,qfqm}
level.

Functions for downloading,
calibrating, and analyzing atmospheric isotope data bundled
into the eddy covariance data products of the National Ecological
Observatory Network (NEON) <https://www.neonscience.org>.
Calibration tools are provided for carbon and water isotope products.
Carbon isotope calibration details are found in Fiorella et al. (2021)
<doi:10.1029/2020JG005862>, and the readme
file at <https://github.com/lanl/NEONiso>. Tools for calibrating water
isotope products have been added as of 0.6.0, but have known deficiencies
and should be considered experimental and unsupported.

Rich Fiorella

NEONiso

Tools to Calibrate and Work with NEON Atmospheric Isotope Data

setup_output_file function

<dl><dt>inname</dt>
<dd>Input file name.</dd>
<dt>outname</dt>
<dd>Output file name.</dd>
<dt>site</dt>
<dd>NEON 4-letter site code.</dd>
<dt>analyte</dt>
<dd>Carbon ('Co2') or water ('H2o') system?</dd></dl>

Arguments

Rich Fiorella <a href="/link/rfiorella%40lanl.gov?package=NEONiso&version=0.7.2" data-mini-rdoc="NEONiso::rfiorella@lanl.gov">rfiorella@lanl.gov</a>

Author

Structure a new HDF5 file — setup_output_file

<dl>

<dt>inname</dt>
<dd>Input file name.</dd>


<dt>outname</dt>
<dd>Output file name.</dd>


<dt>site</dt>
<dd>NEON 4-letter site code.</dd>


<dt>analyte</dt>
<dd>Carbon ('Co2') or water ('H2o') system?</dd>

</dl>

Rich Fiorella <a href='mailto:rfiorella@lanl.gov'>rfiorella@lanl.gov</a>

setup_output_file: Structure a new HDF5 file

Description

Usage

Value

Arguments

Author