metaHeatmap

metaHeatmap,matrix-method

metaHeatmap-methods

metaHeatmap,NMFfitX-method

metaHeatmap,NMF-method

NMF-defunct

object


  Defunct Functions and Classes in the NMF Package


methods

Provides a framework to perform Non-negative Matrix
Factorization (NMF). The package implements a set of already published algorithms
and seeding methods, and provides a framework to test, develop and plug
new/custom algorithms. Most of the built-in algorithms have been optimized
in C++, and the main interface function provides an easy way of performing
parallel computations on multicore machines.

Renaud Gaujoux

Algorithms and Framework for Nonnegative Matrix Factorization
(NMF)

NMF-defunct function

<dl> <dt>metaHeatmap</dt><dd><code>signature(object = "matrix")</code>:
  Defunct method substituted by <code><a rd-options="" href="/link/aheatmap?package=NMF&version=0.20.6" data-mini-rdoc="NMF::aheatmap">aheatmap</a></code>. </dd> <dt>metaHeatmap</dt><dd><code>signature(object = "NMF")</code>:
  Deprecated method that is substituted by
  <code><a rd-options="" href="/link/coefmap?package=NMF&version=0.20.6" data-mini-rdoc="NMF::coefmap">coefmap</a></code> and <code><a rd-options="" href="/link/basismap?package=NMF&version=0.20.6" data-mini-rdoc="NMF::basismap">basismap</a></code>. </dd> <dt>metaHeatmap</dt><dd><code>signature(object = "NMFfitX")</code>:
  Deprecated method subsituted by
  <code><a rd-options="" href="/link/consensusmap?package=NMF&version=0.20.6" data-mini-rdoc="NMF::consensusmap">consensusmap</a></code>. </dd> </dl> 

Methods

Defunct Functions and Classes in the NMF Package

NMF-defunct: Defunct Functions and Classes in the NMF Package

Description

Usage

Arguments

Methods