system_cmd

<a href="https://lifecycle.r-lib.org/articles/stages.html#stable"><img src="figures/lifecycle-stable.svg?package=NMproject&version=0.6.9" alt="[Stable]"></a>
Will run <code>getOption("system_cmd")</code>. A OS agnostic interface to the system
terminal. Most of the time this will be the same as <code>system_nm</code> except when
the PsN/NONMEM execution server is location in a different location to the
RStudio server.

Industrialisation of 'NONMEM'
<https://www.iconplc.com/innovation/nonmem/> via fully and rapidly reusable
model development 'workflows' entirely within 'RStudio'. Quickly get started
with new models by importing 'NONMEM' templates from the built-in code
library. Manipulate 'NONMEM' code from within R either via the tracked
'manual edit' interface or 'programmatically' via convenience functions.
Script 'workflows' by piping sequences of model building steps from control
file creation, to execution, to post-processing and evaluation. Run caching
makes 'workflows' R markdown friendly for easy documentation of thoughts and
modelling decisions alongside executable code. Share, reuse and recycle
'workflows' for new problems.

Tarj Sahota

NMproject

Script Based 'NONMEM' Model Development

AstraZeneca 

Nuria Buil Bruna

Stein Schalkwijk

system_cmd function

<dl><dt>cmd</dt>
<dd>Character. Command to send to shell.</dd>
<dt>dir</dt>
<dd>Optional character. Directory to run command in (default = current
working directory)</dd>
<dt>...</dt>
<dd>Other arguments passed to system command.</dd></dl>

Arguments

<a href='https://lifecycle.r-lib.org/articles/stages.html#stable'><img src='figures/lifecycle-stable.svg' alt='[Stable]' /></a>
Will run <code>getOption("system_cmd")</code>. A OS agnostic interface to the system
terminal. Most of the time this will be the same as <code>system_nm</code> except when
the PsN/NONMEM execution server is location in a different location to the
RStudio server.

System/shell command wrapper — system_cmd

<dl>

<dt>cmd</dt>
<dd>Character. Command to send to shell.</dd>


<dt>dir</dt>
<dd>Optional character. Directory to run command in (default = current
working directory)</dd>


<dt>...</dt>
<dd>Other arguments passed to system command.</dd>

</dl>

system_cmd: System/shell command wrapper

Description

Usage

Value

Arguments

Examples