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NPMPM (version 1.0)

tertiary probabilistic model in predictive microbiology for use in food manufacture

Description

The main method npmpm calculates bacterial concentrations during food manufacture after a contamination. Variability and uncertainty are included by use of probability distributions and Monte Carlo Simulation. The model aims at predicting possible bacterial concentrations at one certain point in time s, e.g. at the end of a process chain. The process steps of this process chain are run through in linear order. Experimental data that match current process step conditions are gathered, and one deterministic primary model is fitted to every series of measured values. From every fitted curve one concentration of bacteria at time s is computed, yielding a set of concentrations. This sample of possible contamination sizes is assumed to follow a certain probability distribution. After calculation of distribution parameters, one value is randomly drawn from this probability distribution. This value may be modified, and then serves as contamination for the next process step.

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Version

Install

install.packages('NPMPM')

Monthly Downloads

3

Version

1.0

License

GPL (>= 2)

Maintainer

Nadine Schoene

Last Published

October 29th, 2012

Functions in NPMPM (1.0)

npmpm

main method of the package NPMPM
numberiterations

stop criterion
NPMPM-package

tertiary probabilistic model in predictive microbiology for use in food manufacture
onestep

calculates the bacterial count at the end of a process step
psteppar

function that returns one process step duration
apsomv

function that selects the series of measured values
allneded

loads all packages this package depends on
makepdfoutput

generates a .pdf file with information about simulation settings and results
cfuinterpolation

interpolation method