NRAHDLTP (version 0.1.2)

COVID19: NRAHDLTP_data COVID19

Description

A COVID19 data set from NCBI with ID GSE152641. The data set profiled peripheral blood from 24 healthy controls and 62 prospectively enrolled patients with community-acquired lower respiratory tract infection by SARS-COV-2 within the first 24 hours of hospital admission using RNA sequencing.

Usage

data(COVID19)

Format

'COVID19'

A data frame with 86 observations on the following 2 groups.

healthy group1

row 2 to row 19, and row 82 to 87, in total 24 healthy controls

patients group2

row 20 to 81, in total 62 prospectively enrolled patients

References

Thair SA, He YD, Hasin-Brumshtein Y, Sakaram S et al. Transcriptomic similarities and differences in host response between SARS-CoV-2 and other viral infections. iScience 2021 Jan 22;24(1):101947. PMID: 33437935

Examples

library(NRAHDLTP)
data(COVID19)
dim(COVID19)
group1 <- as.matrix(COVID19[c(2:19, 82:87), ])
dim(group1)
group2 <- as.matrix(COVID19[-c(1:19, 82:87), ])
dim(group2)