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NSA (version 0.0.2)

Post-normalization of total copy numbers

Description

Post-normalization of total copy-number estimates.

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Version

Install

install.packages('NSA')

Monthly Downloads

1

Version

0.0.2

License

LGPL (>= 2.1)

Maintainer

Maria Ortiz-Estevez

Last Published

November 9th, 2011

Functions in NSA (0.0.2)

process.SampleNormalization

Finds normal regions within tumoral samples
sampleNByTotalAndFracB.numeric

Normalize total copy numbers by samples (total,fracB)
snpsNByTotalAndFracB.matrix

Normalize allele-specific copy numbers (total,fracB)
NSAByTotalAndFracB.matrix

Finds normal regions within tumoral samples (total,fracB)
SNPsNormalization

The SNPsNormalization class
fitNSA.matrix

Find normal regions
NSANormalization

The NSANormalization class
SampleNormalization

The SampleNormalization class
NSA-package

Package NSA
Non-documented objects

Non-documented objects
process.NSANormalization

Finds normal regions within tumoral samples