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NSA (version 0.0.3)
Post-normalization of total copy numbers
Description
Post-normalization of total copy-number estimates.
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Version
0.0.32
0.0.31
0.0.3
0.0.2
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Install
install.packages('NSA')
Monthly Downloads
40
Version
0.0.3
License
LGPL (>= 2.1)
Maintainer
Maria Ortiz-Estevez
Last Published
September 17th, 2012
Functions in NSA (0.0.3)
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process.SampleNormalization
Finds normal regions within tumoral samples
SNPsNormalization
The SNPsNormalization class
NSA-package
Package NSA
NSANormalization
The NSANormalization class
process.NSANormalization
Finds normal regions within tumoral samples
fitNSA.matrix
Find normal regions
Non-documented objects
Non-documented objects
NSAByTotalAndFracB.matrix
Finds normal regions within tumoral samples (total,fracB)
sampleNByTotalAndFracB.numeric
Normalize total copy numbers by samples (total,fracB)
SampleNormalization
The SampleNormalization class
snpsNByTotalAndFracB.matrix
Normalize allele-specific copy numbers (total,fracB)