estNormalizationFactors,estNormalizationFactors-method

estNormalizationFactors

NanoStringData


   This function estimates positive size factors, background noise and 
   housekeeping size factors for the input "NanoStringSet" object and 
   return the same object with positiveFactor, negativeFactor and 
   housekeepingFactor slots filled or replaced.


 normalization

This Package utilizes a generalized linear model(GLM) of
the negative binomial family to characterize count data and
allows for multi-factor design. NanoStrongDiff incorporate size
factors, calculated from positive controls and housekeeping
controls, and background level, obtained from negative
controls, in the model framework so that all the normalization
information provided by NanoString nCounter Analyzer is fully
utilized.

hong wang

NanoStringDiff

Differential Expression Analysis of NanoString nCounter Data

estNormalizationFactors function

This function estimates positive size factors, background noise and 
   housekeeping size factors for the input "NanoStringSet" object and 
   return the same object with positiveFactor, negativeFactor and 
   housekeepingFactor slots filled or replaced.

estNormalizationFactors: estimate normalization factors,include positive size factors, background noise, housekeeping size factors.

Description

Usage

Arguments

Value

Examples