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NanoStringNorm (version 1.0.11)
Normalize NanoString miRNA and mRNA data
Description
The function is used to Normalize Nanostring data
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Install
install.packages('NanoStringNorm')
Monthly Downloads
203
Version
1.0.11
License
GPL-2
Maintainer
Daryl Waggott
Last Published
January 27th, 2012
Functions in NanoStringNorm (1.0.11)
Search functions
probe.correction.factor.normalization
probe.correction.factor.normalization
get.mean.sd.and.cv
get.mean.sd.and.cv
get.trait.summary.stats
get.trait.summary.stats
get.sample.summary.stats
get.sample.summary.stats
NanoString.mRNA
A data.frame consisting of Nanostring Rat RNA expression values. The data were exported as a tab delimited file from the XLS results.
get.gene.summary.stats
get.gene.summary.stats
get.batch.effects
get.batch.effects
code.count.normalization
code.count.normalization
NanoStringNorm
NanoStringNorm
NanoStringNorm-package
A set of functions for Normalization of Nanostring miRNA and RNA expression levels. Currently, only one function "NanoStringNorm" is used for all combinations of Normalization.
sample.content.normalization
sample.content.normalization
NanoString
An rda file storing NanoString example datasets. Currently, a data.frame consisting of Nanostring Rat RNA expression values. The data were exported as a tab delimited file from the XLS results.
get.geo.mean
get.geo.mean
output.formatting
output.formatting
background.normalization
background.normalization
read.xls.RCC
read.xls.RCC
other.normalization
other.normalization
predict.concentration
predict.concentration
get.beta.se.and.p
get.beta.se.and.p
get.ttest.and.foldchange
get.ttest.and.foldchange
Plot.NanoStringNorm
Plot.NanoStringNorm