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NanoStringNorm (version 1.0.2)
Normalize NanoString miRNA and mRNA data
Description
The function is used to Normalize Nanostring data
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Install
install.packages('NanoStringNorm')
Monthly Downloads
259
Version
1.0.2
License
GPL-2
Maintainer
Daryl Waggott
Last Published
September 16th, 2011
Functions in NanoStringNorm (1.0.2)
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background.normalization
background.normalization
NanoStringNorm-package
A set of functions for Normalization of Nanostring miRNA and RNA expression levels. Currently, only one function "NanoStringNorm" is used for all combinations of Normalization.
predict.concentration
predict.concentration
get.gene.summary.stats
get.gene.summary.stats
other.normalization
other.normalization
get.ttest.and.foldchange
get.ttest.and.foldchange
get.trait.summary.stats
get.trait.summary.stats
get.batch.effects
get.batch.effects
output.formatting
output.formatting
probe.correction.factor
probe.correction.factor
Plot.NanoStringNorm
Plot.NanoStringNorm
sample.content.normalization
sample.content.normalization
code.count.normalization
code.count.normalization
NanoStringNorm
NanoStringNorm
get.mean.sd.and.cv
get.mean.sd.and.cv
get.geo.mean
get.geo.mean
NanoString
An rda file storing NanoString example datasets. Curreintly, a data.frame consisting of Nanostring Rat RNA expression values. The data were exported as a tab delimited file from the XLS results.
get.sample.summary.stats
get.sample.summary.stats
get.beta.se.and.p
get.beta.se.and.p
NanoString.mRNA
A data.frame consisting of Nanostring Rat RNA expression values. The data were exported as a tab delimited file from the XLS results.