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NanoStringQCPro (version 1.4.0)

flagSamplesTech,RccSet-method: flagSamplesTech

Description

Flag samples based on their technical performance, i.e. field of vision (FOV) counted and binding density

Usage

"flagSamplesTech"(rccSet)

Arguments

rccSet
An RccSet object

Value

A numeric vector giving the indices of samples with outlier values in FOV counted and binding density < 0.05 or > 2.25 (thresholds defined by NanoString) will be flagged.

Details

Samples with a FOV counted/FOV count of less than 80