getBlankLabel

getBlankLabel,RccSet-method

rccSet

Logical. If FALSE, no warnings will be generated (if any).

showWarnings


Returns the phenoData SampleType value that indicates blank samples (i.e. water runs).
This value is parsed from the single-quoted string enclosed by "blankLabel='...'"
in the varMetadata for SampleType.


NanoStringQCPro provides a set of quality metrics that can
be used to assess the quality of NanoString mRNA gene
expression data -- i.e. to identify outlier probes and outlier
samples. It also provides different background subtraction and
normalization approaches for this data. It outputs suggestions
for flagging samples/probes and an easily sharable html quality
control output.

Robert Ziman

NanoStringQCPro

Quality metrics and data processing methods for NanoString mRNA
gene expression data

getBlankLabel,RccSet-method function

Returns the phenoData SampleType value that indicates blank samples (i.e. water runs).
This value is parsed from the single-quoted string enclosed by "blankLabel='...'"
in the varMetadata for SampleType.

getBlankLabel,RccSet-method: Get the SampleType value that indicates blank samples

Description

Usage

Arguments

Value

Examples