fuzzy_genus_match

This function performs fuzzy matching of nematode genus names against a reference database
using Levenshtein distance (edit distance) with case insensitivity.

Nematode communities serve as crucial bioindicators in
ecological studies, reflecting soil health, ecosystem functioning, and
trophic interactions. To standardize these assessments, we developed a
computational toolkit for quantifying nematode-based ecological
indicators, including metabolic footprints, energy flow metrics, and
community structure analysis.

Yuxuan He

Nematode

Ecological Indices Calculator for Nematode Communities

Dong Wang

fuzzy_genus_match function

<dl><dt>Query.genus</dt>
<dd>A <code>character vector</code> of genus names to be matched against the reference</dd>
<dt>max_dist</dt>
<dd>Maximum allowed Levenshtein distance for matches (default = 2)</dd>
<dt>...</dt>
<dd>Additional parameters (currently unused)</dd></dl>

Arguments

Fuzzy Matching of Nematode Genus Names — fuzzy_genus_match

<dl>

<dt>Query.genus</dt>
<dd>A <code>character vector</code> of genus names to be matched against the reference</dd>


<dt>max_dist</dt>
<dd>Maximum allowed Levenshtein distance for matches (default = 2)</dd>


<dt>...</dt>
<dd>Additional parameters (currently unused)</dd>

</dl>

fuzzy_genus_match: Fuzzy Matching of Nematode Genus Names

Description

Usage

Value

Arguments

Examples