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Sensitivity Analysis of ODE Models

A package to perform sensitivity analysis for ordinary differential equation (ode) models, e.g. the FitzHugh-Nagumo equations (cf. Ramsay et al., 2007) or low frequency oscillations (LFOs) in an electrical system (cf. Surmann et al., 2014). The package utilizes the ode interface from deSolve and connects it with the sensitivity analysis from sensitivity. Additionally we add a method to run the sensitivity analysis on variables with class ODEnetwork. A detailed plotting function provides outputs on the calculations.

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Install

install.packages('ODEsensitivity')

Monthly Downloads

40

Version

1.1.2

License

LGPL-3

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Maintainer

Dirk Surmann

Last Published

January 9th, 2019

Functions in ODEsensitivity (1.1.2)

ODEsobol.default

Sobol' Sensitivity Analysis for General ODE Models
ODEmorris.ODEnetwork

Morris Screening for Objects of Class ODEnetwork
tdcc

A Measure of Top-Down Correlation
ODEsensitivity

Performing Sensitivity Analysis in ODE Models
ODEsobol.ODEnetwork

Sobol' Sensitivity Analysis for Objects of Class ODEnetwork
ODEmorris

Morris Screening for ODE Models
ODEsobol

Sobol' Sensitivity Analysis for ODE Models
plot.ODEsobol

Plot of the Results of Sobol' Sensitivity Analysis for Objects of Class ODEsobol
ODEmorris.default

Morris Screening for General ODE Models
plot.ODEmorris

Plot of the Results of Morris Screening for Objects of Class ODEmorris