OhdsiReportGenerator (version 2.0.2)

getCmOutcomes: A function to extract the outcomes found in cohort method

Description

A function to extract the outcomes found in cohort method

Usage

getCmOutcomes(
  connectionHandler,
  schema,
  cmTablePrefix = "cm_",
  cgTablePrefix = "cg_",
  targetId = NULL
)

Value

A data.frame with the cohort method outcome ids and names.

Arguments

connectionHandler

A connection handler that connects to the database and extracts sql queries. Create a connection handler via `ResultModelManager::ConnectionHandler$new()`.

schema

The result database schema (e.g., 'main' for sqlite)

cmTablePrefix

The prefix used for the cohort method results tables

cgTablePrefix

The prefix used for the cohort generator results tables

targetId

An integer corresponding to the target cohort ID

Details

Specify the connectionHandler, the schema and the prefixes

See Also

Other Estimation: getCMEstimation(), getCmDiagnosticsData(), getCmMetaEstimation(), getCmNegativeControlEstimates(), getCmPropensityModel(), getCmTable(), getCmTargets(), getSccsDiagnosticsData(), getSccsEstimation(), getSccsMetaEstimation(), getSccsModel(), getSccsNegativeControlEstimates(), getSccsOutcomes(), getSccsTable(), getSccsTargets(), getSccsTimeToEvent(), plotCmEstimates(), plotSccsEstimates()

Examples

conDet <- getExampleConnectionDetails()

connectionHandler <- ResultModelManager::ConnectionHandler$new(conDet)

outcomes <- getCmOutcomes(
  connectionHandler = connectionHandler, 
  schema = 'main'
)