OmicNavigator

OmicNavigator-package

Package options to control package-wide behavior are described below.

A tool for interactive exploration of the results from 'omics'
experiments to facilitate novel discoveries from high-throughput biology. The
software includes R functions for the 'bioinformatician' to deposit study
metadata and the outputs from statistical analyses (e.g. differential
expression, enrichment). These results are then exported to an interactive
JavaScript dashboard that can be interrogated on the user's local machine or
deployed online to be explored by collaborators. The dashboard includes
'sortable' tables, interactive plots including network visualization, and
fine-grained filtering based on statistical significance.

John Blischak

Open-Source Software for 'Omic' Data Analysis and Visualization

Terrence Ernst

Paul Nordlund

Justin Moore

Joe Dalen

Akshay Bhamidipati

Brett Engelmann

Marco Curado

Joe LoGrasso

AbbVie Inc. 

OmicNavigator-package function

Maintainer: John Blischak <a href="/link/jdblischak%40gmail.com?package=OmicNavigator&version=1.13.13" data-mini-rdoc="OmicNavigator::jdblischak@gmail.com">jdblischak@gmail.com</a> (<a href="https://orcid.org/0000-0003-2634-9879">ORCID</a>)
Authors:<ul>
<li>Terrence Ernst (Web application)</li>
<li>Paul Nordlund (Web application)</li>
<li>Justin Moore (UpSet-related functions and web application)</li>
<li>Joe Dalen (Barcode functionality and web application)</li>
<li>Akshay Bhamidipati (Web application)</li>
<li>Brett Engelmann <a href="/link/brett.engelmann%40abbvie.com?package=OmicNavigator&version=1.13.13" data-mini-rdoc="OmicNavigator::brett.engelmann@abbvie.com">brett.engelmann@abbvie.com</a></li>
<li>Marco Curado (Improved plotting capabilities)</li>
<li>Joe LoGrasso (Support for plotly)</li>
</ul>Other contributors:<ul>
<li>AbbVie Inc. [copyright holder, funder]</li>
</ul>

Author

OmicNavigator — OmicNavigator-package

Maintainer: John Blischak <a href='mailto:jdblischak@gmail.com'>jdblischak@gmail.com</a> (<a href='https://orcid.org/0000-0003-2634-9879'>ORCID</a>)
Authors:<ul>
<li>Terrence Ernst (Web application)</li>
<li>Paul Nordlund (Web application)</li>
<li>Justin Moore (UpSet-related functions and web application)</li>
<li>Joe Dalen (Barcode functionality and web application)</li>
<li>Akshay Bhamidipati (Web application)</li>
<li>Brett Engelmann <a href='mailto:brett.engelmann@abbvie.com'>brett.engelmann@abbvie.com</a></li>
<li>Marco Curado (Improved plotting capabilities)</li>
<li>Joe LoGrasso (Support for plotly)</li>
</ul>

Other contributors:<ul>
<li>AbbVie Inc. [copyright holder, funder]</li>
</ul>

OmicNavigator-package: OmicNavigator

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