Add annotations
addAnnotations(study, annotations, reset = FALSE)Returns the original onStudy object passed to the argument
study, but modified to include the newly added data
An OmicNavigator study created with createStudy
The annotations used for the enrichment analyses. The
input is a nested list. The top-level list contains one entry per
annotation database, e.g. reactome. The names correspond to the name of
each annotation database. Each of these elements should be a list that
contains more information about each annotation database. Specifically the
sublist should contain 1) description, a character vector that
describes the resource, 2) featureID, the name of the column in the
features table that was used for the enrichment analysis, and 3) terms,
a list of annotation terms. The names of terms sublist correspond to
the name of the annotation terms. Each of the annotation terms should be a
character vector of featureIDs.
Reset the data prior to adding the new data (default:
FALSE). The default is to add to or modify any previously added data
(if it exists). Setting reset = TRUE enables you to remove existing
data you no longer want to include in the study.