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OmicNavigator (version 1.13.13)

group: group from Bioconductor workflow RNAseq123

Description

A subset of the object group from Bioconductor workflow RNAseq123.

Usage

group

Arguments

Format

A factor with 3 levels:

Basal

Basal cells

LP

Luminal progenitor cells

ML

Mature luminal cells

References

Law CW, Alhamdoosh M, Su S, Dong X, Tian L, Smyth GK, Ritchie ME. RNA-seq analysis is easy as 1-2-3 with limma, Glimma and edgeR [version 3; peer review: 3 approved]. F1000Research 2018, 5:1408 tools:::Rd_expr_doi("10.12688/f1000research.9005.3")

Sheridan, J.M., Ritchie, M.E., Best, S.A. et al. A pooled shRNA screen for regulators of primary mammary stem and progenitor cells identifies roles for Asap1 and Prox1. BMC Cancer 2015, 15:221 tools:::Rd_expr_doi("10.1186/s12885-015-1187-z")

Examples

Run this code
  table(group)
  str(group)

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