OmicsPLS (version 2.0.2)

Data Integration with Two-Way Orthogonal Partial Least Squares

Description

Performs the O2PLS data integration method for two datasets, yielding joint and data-specific parts for each dataset. The algorithm automatically switches to a memory-efficient approach to fit O2PLS to high dimensional data. It provides a rigorous and a faster alternative cross-validation method to select the number of components, as well as functions to report proportions of explained variation and to construct plots of the results. See the software article by el Bouhaddani et al (2018) , and Trygg and Wold (2003) . It also performs Sparse Group (Penalized) O2PLS, see Gu et al (2020) and cross-validation for the degree of sparsity.

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Install

install.packages('OmicsPLS')

Monthly Downloads

232

Version

2.0.2

License

GPL-3

Maintainer

Last Published

May 19th, 2021

Functions in OmicsPLS (2.0.2)