OmnibusFisher (version 1.0)

A Modified Fisher<e2><80><99>s Method to Test Overall Gene-Level Effect

Description

The separate p-values of SNPs, RNA expressions and DNA methylations are calculated by KM regression. The correlation between different omics data are taken into account. This method can be applied to either samples with all three types of omics data or samples with two types.

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Version

Install

install.packages('OmnibusFisher')

Monthly Downloads

160

Version

1.0

License

GPL (>= 2)

Maintainer

Qi Yan

Last Published

December 19th, 2018

Functions in OmnibusFisher (1.0)

OmnibusFisher

A modified Fisher<U+2019>s method (Omnibus-Fisher) to combine separate p-values of SNPs, RNA expressions and DNA methylations into an overall gene-level p-value

example_data

This is the data for examples