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OpEnHiMR (version 0.1.0)

Optimization Based Ensemble Model for Prediction of Histone Modifications in Rice

Description

The comprehensive knowledge of epigenetic modifications in plants, encompassing histone modifications in regulating gene expression, is not completely ingrained. It is noteworthy that histone deacetylation and histone H3 lysine 27 trimethylation (H3K27me3) play a role in repressing transcription in eukaryotes. In contrast, histone acetylation (H3K9ac) and H3K4me3 have been inevitably linked to the stimulation of gene expression, which significantly influences plant development and plays a role in plant responses to biotic and abiotic stresses. To our knowledge this the first multiclass classifier for predicting histone modification in plants. .

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Version

Install

install.packages('OpEnHiMR')

Monthly Downloads

501

Version

0.1.0

License

GPL-3

Maintainer

Dipro Sinha

Last Published

May 26th, 2024

Functions in OpEnHiMR (0.1.0)

pred_hmc

Prediction of Histone Modification for Multiclass Data