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PAC (version 1.0.1)

packedCircleInput: Make packed circles plot illustrating the cluster proportions across multiple samples.

Description

Make packed circles plot illustrating the cluster proportions across multiple samples.

Usage

packedCircleInput(data_agg, cluster_names, CountFilter = 1000,
  filename = "zoomablePackedCirclesInput.txt")

Arguments

data_agg
Variable name of aggregated data.
cluster_names
The annotated cluster names
CountFilter
The filter threshold to remove clusters with event numbers below the threshold.
filename
Set to zoomablePackedCirclesInput.txt or the name of choice for the html that draws the packed circles.

Value

  • Saves the D3 packed circles plot input in the working directory.