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PAGWAS (version 2.0)

PAGWAS-package: Pathway Analysis Methods for Genomewide Association Data

Description

Bayesian hierarchical methods for pathway analysis of genomewide association data: Normal/Bayes factors and Sparse Normal/Adaptive lasso. The Frequentist Fisher's method is included as well.

Arguments

Details

Package:
PAGWAS
Type:
Package
Version:
2.0
Date:
2015-12-02
License:
GPL (>=2)
LazyLoad:
yes

References

Evangelou, M., Dudbridge, F., Wernisch, L. (2014). Two novel pathway analysis methods based on a hierarchical model. Bioinformatics 30(5), 690 - 697

Evangelou, M., Rendon, A., Ouhewand, W. H., Wernisch, L., Dudbridge, F. (2012) Comparison of methods for competitive tests of pathway analysis. Plos One 7(7): e41018