RDocumentation
Moon
Learn R
Search all packages and functions
⚠️
There's a newer version (1.4) of this package.
Take me there.
PBD (version 1.0)
Protracted birth-death model of diversification
Description
Maximum likelihood analysis of the protracted speciation model
Copy Link
Copy
Link to current version
Version
Version
1.4
1.3
1.2
1.1
1.0
0.9
0.8
Down Chevron
Install
install.packages('PBD')
Monthly Downloads
200
Version
1.0
License
GPL-2
Maintainer
Rampal Etienne
Last Published
May 26th, 2014
Functions in PBD (1.0)
Search functions
PBD-package
Protracted birth-death model of diversification
pbd_bootstrap
Bootstrap analysis under protracted birth-death model of diversification
pbd_durspec_var
Variance in duration of speciation under protracted birth-death model of diversification
pbd_sim_cpp
Function to simulate the approximate protracted speciation process
pbd_durspec_density
Probability density for duration of speciation under protracted birth-death model of diversification
PBD-internal
Internal PBD Functions
pbd_loglik
Loglikelihood for protracted birth-death model of diversification
pbd_durspec_cumdensity
Cumulative density of duration of speciation under protracted birth-death model of diversification
pbd_brts_density
Node depth probbaility density for protracted birth-death model of diversification
pbd_sim
Function to simulate the protracted speciation process
pbd_durspec_mean
Mean duration of speciation under protracted birth-death model of diversification
pbd_ML
Maximization of loglikelihood under protracted birth-death model of diversification
pbd_durspec_mode
mode of the duration of speciation under protracted birth-death model of diversification
pbd_durspec_quantile
Quantiles of duration of speciation under protracted birth-death model of diversification
pbd_durspec_moment
Moments of duration of speciation under protracted birth-death model of diversification