PCAN (version 1.0.2)

hp_class: HP class (Example data)

Description

Each HP term can be of one or several classes. Classes are HP terms direct descendants of the 'Phenotypic abnormality' term.

Format

A named list of 10962 character vectors.

Source

http://compbio.charite.de/hudson/job/hpo/1529/artifact/hp/hp.obo

Details

These data are used to examplify the different functions of the package. More data are available in the MultiHumanPhenoDB package.

Examples

data(hpDef, hp_class, package="PCAN")
hp <- "HP:0100089"
hpDef[which(hpDef$id==hp),]
# This term has 2 classes:
hpDef[which(hpDef$id %in% hp_class[[hp]]),]